Stem-loop gga-mir-12259

Accession

MI0040724

Description

Gallus gallus gga-mir-12259 precursor miRNA

Sequence

2682 reads, 2.0 reads per million, 185 experiments

gUGCAGGUAGGCAGGGGGAGCAGGcugugugcugguugccuaccgucUGCCUCUUUGUCUAUCUGCAGA
.(((((((((((((((((.((((((.(((.((.....)).))).)))))))))))))))))))))))..

Structure

-g                 A      u   u  u 
  UGCAGGUAGGCAGGGGG GCAGGc gug gc g
  ||||||||||||||||| |||||| ||| || g
  ACGUCUAUCUGUUUCUC CGUcug cau cg u
AG                 -      c   c  u 

Annotation confidence Not enough data

Genome context

3: 29953398-29953466 [+]

Mature gga-miR-12259-5p

• Accession: MIMAT0050009
• Description: Gallus gallus gga-miR-12259-5p mature miRNA
• Sequence: 2 - UGCAGGUAGGCAGGGGGAGCAGG - 24
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12259-3p

• Accession: MIMAT0050010
• Description: Gallus gallus gga-miR-12259-3p mature miRNA
• Sequence: 48 - UGCCUCUUUGUCUAUCUGCAGA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973