Stem-loop gga-mir-10c

Accession

MI0040732

Description

Gallus gallus gga-mir-10c precursor miRNA

Literature search

7 open access papers mention gga-mir-10c
(14 sentences)

Sequence

7481 reads, 179 reads per million, 5 experiments

UACCCUGUAGACUCGAAUUUGUgugagcgucuccgagucgCAAAUUCGUCUCUAGGGGAAUa
...(((.((((..((((((((((....((....))...))))))))))..)))).)))....

Structure

-UAC   G    CU          ugag  u 
    CCU UAGA  CGAAUUUGUg    cg c
    ||| ||||  ||||||||||    ||  
    GGG AUCU  GCUUAAACgc    gc u
aUAA   G    CU          -uga  c 

Annotation confidence Not enough data

Genome context

chr33: 1093263-1093324 [+]

Mature gga-miR-10c-5p

• Accession: MIMAT0050024
• Description: Gallus gallus gga-miR-10c-5p mature miRNA
• Sequence: 1 - UACCCUGUAGACUCGAAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature gga-miR-10c-3p

• Accession: MIMAT0050025
• Description: Gallus gallus gga-miR-10c-3p mature miRNA
• Sequence: 41 - CAAAUUCGUCUCUAGGGGAAU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973