Stem-loop gga-mir-148b

Accession

MI0040733

Description

Gallus gallus gga-mir-148b precursor miRNA

Literature search

2 open access papers mention gga-mir-148b
(2 sentences)

Sequence

49462 reads, 693 reads per million, 5 experiments

cGAGGUUCUGUCCUACACUCCGGCUguggcuaugggcagUCAGUGCAUCACAGAACUUGGU
(.(((((((((....((((..((((((........))))))))))....))))))))).).

Structure

- G         CCUA    CC      ggc 
 c AGGUUCUGU    CACU  GGCUgu   u
 | |||||||||    ||||  ||||||    
 G UUCAAGACA    GUGA  CUgacg   a
U G         CUAC    --      ggu 

Annotation confidence High

Genome context

chr33: 1171913-1171973 [+]

Mature gga-miR-148b-5p

• Accession: MIMAT0050026
• Description: Gallus gallus gga-miR-148b-5p mature miRNA
• Sequence: 2 - GAGGUUCUGUCCUACACUCCGGCU - 25
• Evidence: experimental ; Illumina [1]

Mature gga-miR-148b-3p

• Accession: MIMAT0050027
• Description: Gallus gallus gga-miR-148b-3p mature miRNA
• Sequence: 40 - UCAGUGCAUCACAGAACUUGGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973