Stem-loop gga-mir-12271

Accession

MI0040738

Description

Gallus gallus gga-mir-12271 precursor miRNA

Sequence

390 reads, 7.0 reads per million, 68 experiments

ucauUGGUUCAUGCUGUGAAGGGGUuggaguguaguggauuuccUAGGUCACAGUCUGAACCAAUGGg
(((((((((((.(((((((...((..(((((.......)))))))...))))))).))))))))))).

Structure

-           U       AGG  Uu     gu 
 ucauUGGUUCA GCUGUGA   GG  ggagu  a
 ||||||||||| |||||||   ||  |||||  g
 GGUAACCAAGU UGACACU   Uc  cuuua  u
g           C       GGA  --     gg 

Annotation confidence High

Genome context

4: 20426843-20426910 [-]

Mature gga-miR-12271-5p

• Accession: MIMAT0050035
• Description: Gallus gallus gga-miR-12271-5p mature miRNA
• Sequence: 5 - UGGUUCAUGCUGUGAAGGGGU - 25
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12271-3p

• Accession: MIMAT0050036
• Description: Gallus gallus gga-miR-12271-3p mature miRNA
• Sequence: 45 - UAGGUCACAGUCUGAACCAAUGG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973