Stem-loop gga-mir-210b

Accession

MI0040748

Description

Gallus gallus gga-mir-210b precursor miRNA

Literature search

4 open access papers mention gga-mir-210b
(51 sentences)

Sequence

405 reads, 3.0 reads per million, 68 experiments

uuAGCCGCUGUCACACGCACAGuggagucgccgagagcacaAUGUGCGUUAGUCAGUGGCUCa
..((((((((.(..(((((((.((...((.....))...)).)))))))..).))))))))..

Structure

uu        U AC       G  gag  g 
  AGCCGCUG C  ACGCACA ug   uc c
  |||||||| |  ||||||| ||   || c
  UCGGUGAC G  UGCGUGU ac   ag g
aC        U AU       A  acg  a 

Annotation confidence Medium

Genome context

5: 15483485-15483547 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-210b

Mature gga-miR-210b-5p

• Accession: MIMAT0050054
• Description: Gallus gallus gga-miR-210b-5p mature miRNA
• Sequence: 3 - AGCCGCUGUCACACGCACAG - 22
• Evidence: experimental ; Illumina [1]

Mature gga-miR-210b-3p

• Accession: MIMAT0050055
• Description: Gallus gallus gga-miR-210b-3p mature miRNA
• Sequence: 42 - AUGUGCGUUAGUCAGUGGCUC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973