Stem-loop gga-mir-12288

Accession

MI0040760

Description

Gallus gallus gga-mir-12288 precursor miRNA

Sequence

4360 reads, 3.0 reads per million, 191 experiments

GGCACGCCGGGAUGCAGCGAGgcgcuuccgcCUCGCUGCAUCCCGGCGUACCccg
((.(((((((((((((((((((((....))))))))))))))))))))).))...

Structure

---  C                     c 
   GG ACGCCGGGAUGCAGCGAGgcg u
   || |||||||||||||||||||||  
   CC UGCGGCCCUACGUCGCUCcgc u
gcc  A                     c 

Annotation confidence Medium

Genome context

30: 444189-444243 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-12288

Mature gga-miR-12288-5p

• Accession: MIMAT0050076
• Description: Gallus gallus gga-miR-12288-5p mature miRNA
• Sequence: 1 - GGCACGCCGGGAUGCAGCGAG - 21
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12288-3p

• Accession: MIMAT0050077
• Description: Gallus gallus gga-miR-12288-3p mature miRNA
• Sequence: 32 - CUCGCUGCAUCCCGGCGUACC - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973