Stem-loop gga-mir-122b-1

Accession

MI0040772

Description

Gallus gallus gga-mir-122b-1 precursor miRNA

Literature search

16 open access papers mention gga-mir-122b-1
(85 sentences)

Sequence

3394 reads, 40.0 reads per million, 120 experiments

UUUAGUGUGAUAAUGGCGUUUGauagauuggacaCAAACACCAUUGUCACACUCCAua
...(((((((((((((.(((((............))))).))))))))))))).....

Structure

--UUU             C     auaga 
     AGUGUGAUAAUGG GUUUG     u
     ||||||||||||| |||||      
     UCACACUGUUACC CAAAC     u
auACC             A     acagg 

Annotation confidence High

Genome context

W: 7599946-7600003 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-122b-1

Mature gga-miR-122b-5p

• Accession: MIMAT0050092
• Description: Gallus gallus gga-miR-122b-5p mature miRNA
• Sequence: 1 - UUUAGUGUGAUAAUGGCGUUUG - 22
• Evidence: experimental ; Illumina [1]

Mature gga-miR-122b-3p

• Accession: MIMAT0050093
• Description: Gallus gallus gga-miR-122b-3p mature miRNA
• Sequence: 35 - CAAACACCAUUGUCACACUCCA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973