Stem-loop gga-mir-12294

Accession

MI0040775

Description

Gallus gallus gga-mir-12294 precursor miRNA

Sequence

5 reads, 0 reads per million, 2 experiments

UCUUCCCUCAGCCAGGCUUGACUacaagaccucaaugagCCAAGCCUCCCAGGGAAGAAGG
((((((((.....(((((((.((.((.........)))).)))))))...))))))))...

Structure

---        CAGCC       A  a  aga 
   UCUUCCCU     AGGCUUG CU ca   c
   ||||||||     ||||||| || ||   c
   AGAAGGGA     UCCGAAC ga gu   u
GGA        --CCC       C  -  aac 

Annotation confidence Not enough data

Genome context

chrZ: 768922-768982 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-12294

Mature gga-miR-12294-5p

• Accession: MIMAT0050094
• Description: Gallus gallus gga-miR-12294-5p mature miRNA
• Sequence: 1 - UCUUCCCUCAGCCAGGCUUGACU - 23
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12294-3p

• Accession: MIMAT0050095
• Description: Gallus gallus gga-miR-12294-3p mature miRNA
• Sequence: 40 - CCAAGCCUCCCAGGGAAGAAGG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973