Stem-loop mdo-mir-12301

Accession

MI0040790

Description

Monodelphis domestica mdo-mir-12301 precursor miRNA

Sequence

29878 reads, 594 reads per million, 5 experiments

uUACAGAUUGGGAAACUGAGGUGugguaaaucuguuuaCCUCGGUCUCCAUAAUCUGUAAagg
(((((((((((((.(((((((((.((.....))...))))))))).))).))))))))))...

Structure

---          -   A         --u  u 
   uUACAGAUUG GGA ACUGAGGUG   gg a
   |||||||||| ||| |||||||||   || a
   AAUGUCUAAU CCU UGGCUCCau   uc a
gga          A   C         uug  u 

Annotation confidence High

Genome context

chr1: 366803975-366804037 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-12301

Mature mdo-miR-12301-5p

• Accession: MIMAT0050114
• Description: Monodelphis domestica mdo-miR-12301-5p mature miRNA
• Sequence: 2 - UACAGAUUGGGAAACUGAGGUG - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12301-3p

• Accession: MIMAT0050115
• Description: Monodelphis domestica mdo-miR-12301-3p mature miRNA
• Sequence: 39 - CCUCGGUCUCCAUAAUCUGUAA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973