miRBase entry: mdo-mir-12302

Stem-loop mdo-mir-12302


Accession
MI0040791
Description
Monodelphis domestica mdo-mir-12302 precursor miRNA


Sequence

1191 reads, 36 reads per million, 5 experiments
UCAGUAAGAUCUUUCAUACUUGcauccuauuauaAGUGUGGAGGAUCUUGCUGUUUu
.(((((((((((((((((((((.(......).)))))))))))))))))))))....

Structure
---U                     c uc 
    CAGUAAGAUCUUUCAUACUUG a  c
    ||||||||||||||||||||| |   
    GUCGUUCUAGGAGGUGUGAau u  u
uUUU                     a ua 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr1: 366806262-366806318 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-12302
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-12302-5p

Accession MIMAT0050116
Description Monodelphis domestica mdo-miR-12302-5p mature miRNA
Sequence 1 - UCAGUAAGAUCUUUCAUACUUG - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12302-3p

Accession MIMAT0050117
Description Monodelphis domestica mdo-miR-12302-3p mature miRNA
Sequence 35 - AGUGUGGAGGAUCUUGCUGUUU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973