Stem-loop mdo-mir-12308a

Accession

MI0040799

Description

Monodelphis domestica mdo-mir-12308a precursor miRNA

Sequence

1301 reads, 21 reads per million, 5 experiments

agUGGAAAGAGCAUUGGAUUUGAaguuugagugccugaguucAAAUCCGUGCUCUGACACUUa
((((...(((((((.(((((((((.((.(.....).)).))))))))))))))))..))))..

Structure

--    GAA       U         g  u a 
  agUG   AGAGCAU GGAUUUGAa uu g g
  ||||   ||||||| ||||||||| || | u
  UCAC   UCUCGUG CCUAAAcuu ag c g
aU    -AG       -         g  u c 

Annotation confidence High

Genome context

chr1: 468988543-468988605 [+]

Mature mdo-miR-12308a-5p

• Accession: MIMAT0050130
• Description: Monodelphis domestica mdo-miR-12308a-5p mature miRNA
• Sequence: 3 - UGGAAAGAGCAUUGGAUUUGA - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12308a-3p

• Accession: MIMAT0050131
• Description: Monodelphis domestica mdo-miR-12308a-3p mature miRNA
• Sequence: 43 - AAAUCCGUGCUCUGACACUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973