miRBase entry: mdo-mir-12311

Stem-loop mdo-mir-12311


Accession
MI0040804
Description
Monodelphis domestica mdo-mir-12311 precursor miRNA


Sequence

16 reads, 1 reads per million, 2 experiments
UGUGGGAGGGGACAAAGCUGUacuuaugaccuucaugaCCGCUUCUGUCCUUUUCUCCCCagc
((.(((((((((((((((.((...(((((...))))))).)))).))))))...)))))))..

Structure
--  U     ---      -    U  acu     c 
  UG GGGAG   GGGACA AAGC GU   uauga  
  || |||||   |||||| |||| ||   ||||| c
  aC CCCUC   UCCUGU UUCG Ca   guacu  
cg  -     UUU      C    C  ---     u 


Annotation confidence Not enough data
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Genome context
chr1: 508387924-508387986 [-]

Database links

Mature mdo-miR-12311-5p

Accession MIMAT0050140
Description Monodelphis domestica mdo-miR-12311-5p mature miRNA
Sequence 1 - UGUGGGAGGGGACAAAGCUGU - 21
Evidence experimental
Illumina [1]

Mature mdo-miR-12311-3p

Accession MIMAT0050141
Description Monodelphis domestica mdo-miR-12311-3p mature miRNA
Sequence 39 - CCGCUUCUGUCCUUUUCUCCCC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973