miRBase entry: mdo-mir-12324b

Stem-loop mdo-mir-12324b


Accession
MI0040835
Description
Monodelphis domestica mdo-mir-12324b precursor miRNA


Sequence

1222 reads, 36 reads per million, 5 experiments
uagguggcacaauggacAAAGCGCCAGGCCUGGAGUcuggaagacucaucuuccUGAGUUCAAAUCUGGCCACAGACACAuaccagcugugugacccugggc
..(((.(((((.(((......(((((((..((((.((.((((((....)))))).)).))))..))))))....).......)))..))))).)))......

Structure
----ua   g     -a   -acAAAG ----      CC    G  u      c 
      ggu gcaca  ugg       C    GCCAGG  UGGA Uc ggaaga u
      ||| |||||  |||       |    ||||||  |||| || ||||||  
      cca ugugu  acc       G    CGGUCU  ACUU AG ccuucu c
cggguc   g     cg   auACACA ACAC      AA    G  U      a 


Annotation confidence High
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Genome context
chr2: 508353810-508353911 [-]

Database links

Mature mdo-miR-12324b-5p

Accession MIMAT0050193
Description Monodelphis domestica mdo-miR-12324b-5p mature miRNA
Sequence 18 - AAAGCGCCAGGCCUGGAGU - 36
Evidence experimental
Illumina [1]

Mature mdo-miR-12324b-3p

Accession MIMAT0050194
Description Monodelphis domestica mdo-miR-12324b-3p mature miRNA
Sequence 55 - UGAGUUCAAAUCUGGCCACAGACACA - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973