miRBase entry: mdo-mir-12333

Stem-loop mdo-mir-12333


Accession
MI0040837
Description
Monodelphis domestica mdo-mir-12333 precursor miRNA


Sequence

187815 reads, 3252 reads per million, 5 experiments
UUUGGAGUGAGAGGAUCUGGUAaguggcgaaacugaaauucgaacCCAGGCCCUCUAACUGCAAAUUcagc
((((.(((.(((((.(((((...((..((((.......)))).))))))).))))).))).))))......

Structure
------    G   G     A     UAa  gg    ac 
      UUUG AGU AGAGG UCUGG   gu  cgaa  u
      |||| ||| ||||| |||||   ||  ||||  g
      AAAC UCA UCUCC GGACC   ca  gcuu  a
cgacUU    G   A     C     ---  -a    aa 


Annotation confidence High
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Genome context
chr2: 522642138-522642208 [-]

Database links

Mature mdo-miR-12333-5p

Accession MIMAT0050196
Description Monodelphis domestica mdo-miR-12333-5p mature miRNA
Sequence 1 - UUUGGAGUGAGAGGAUCUGGUA - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12333-3p

Accession MIMAT0050197
Description Monodelphis domestica mdo-miR-12333-3p mature miRNA
Sequence 46 - CCAGGCCCUCUAACUGCAAAUU - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973