miRBase entry: mdo-mir-122b

Stem-loop mdo-mir-122b


Accession
MI0040849
Description
Monodelphis domestica mdo-mir-122b precursor miRNA


Sequence

961 reads, 0 reads per million, 5 experiments
UUUAGUGUGAUAAUGGCGUUUGauagacuggacacAAACACCAUUGUCACACUCCAUa
...(((((((((((((.(((((............))))).))))))))))))).....

Structure
--UUU             C     auaga 
     AGUGUGAUAAUGG GUUUG     c
     ||||||||||||| |||||      
     UCACACUGUUACC CAAAc     u
aUACC             A     acagg 


Annotation confidence Not enough data
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Genome context
chr3: 247368074-247368131 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-122b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-122b-5p

Accession MIMAT0050214
Description Monodelphis domestica mdo-miR-122b-5p mature miRNA
Sequence 1 - UUUAGUGUGAUAAUGGCGUUUG - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-122b-3p

Accession MIMAT0050215
Description Monodelphis domestica mdo-miR-122b-3p mature miRNA
Sequence 36 - AAACACCAUUGUCACACUCCAU - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973