Stem-loop mdo-mir-12340

Accession

MI0040852

Description

Monodelphis domestica mdo-mir-12340 precursor miRNA

Sequence

UCCCUGUGUGCUCUUCUCUUUUAGGguguuggcaaaccuUAUGGAAACUGGAACCAGGUUUGUGUGG
..((((.((.((....(((..((((((........)))))).)))....)).)))))).........

Structure

-------UC    U  G  CUUC   UU      guu 
         CCUG GU CU    UCU  UAGGgu   g
         |||| || ||    |||  ||||||    
         GGAC CA GG    AGG  AUucca   g
GGUGUGUUU    -  A  UCAA   -U      aac 

Annotation confidence Not enough data

Genome context

chr3: 421520911-421520977 [+]

Mature mdo-miR-12340-5p

• Accession: MIMAT0050220
• Description: Monodelphis domestica mdo-miR-12340-5p mature miRNA
• Sequence: 1 - UCCCUGUGUGCUCUUCUCUUUUAGG - 25
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12340-3p

• Accession: MIMAT0050221
• Description: Monodelphis domestica mdo-miR-12340-3p mature miRNA
• Sequence: 40 - UAUGGAAACUGGAACCAGGUUUGUGUGG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973