miRBase entry: mdo-mir-12342

Stem-loop mdo-mir-12342


Accession
MI0040854
Description
Monodelphis domestica mdo-mir-12342 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
ACAGGGAGAGGGGGCAGCCUGGcucagcccaccaaccccAGGUCUGCCUCCUCUUCCUUCag
..((((((((((((((((((((...............))))).)))))))))))))))....

Structure
--AC               -     cucagc 
    AGGGAGAGGGGGCAG CCUGG      c
    ||||||||||||||| |||||      c
    UCCUUCUCCUCCGUC GGAcc      a
gaCU               U     ccaacc 


Annotation confidence Not enough data
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Genome context
chr3: 446336414-446336475 [+]

Database links

Mature mdo-miR-12342-5p

Accession MIMAT0050224
Description Monodelphis domestica mdo-miR-12342-5p mature miRNA
Sequence 1 - ACAGGGAGAGGGGGCAGCCUGG - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12342-3p

Accession MIMAT0050225
Description Monodelphis domestica mdo-miR-12342-3p mature miRNA
Sequence 40 - AGGUCUGCCUCCUCUUCCUUC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973