miRBase entry: mdo-mir-12343

Stem-loop mdo-mir-12343


Accession
MI0040855
Description
Monodelphis domestica mdo-mir-12343 precursor miRNA


Sequence

55 reads, 1 reads per million, 5 experiments
ACAGGGCUGCACCGAUUUCACCaaagacuuggaagUGAUUUUUGAUGCAGCCCCAGcc
...((((((((.(((..(((((((....))))...)))...))).)))))))).....

Structure
--ACA        C   -UU   ---    a 
     GGGCUGCA CGA   UCA   CCaa g
     |||||||| |||   |||   ||||  
     CCCGACGU GUU   AGU   gguu a
ccGAC        A   UUU   gaa    c 


Annotation confidence Not enough data
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Genome context
chr3: 452322541-452322598 [+]

Database links

Mature mdo-miR-12343-5p

Accession MIMAT0050226
Description Monodelphis domestica mdo-miR-12343-5p mature miRNA
Sequence 1 - ACAGGGCUGCACCGAUUUCACC - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12343-3p

Accession MIMAT0050227
Description Monodelphis domestica mdo-miR-12343-3p mature miRNA
Sequence 36 - UGAUUUUUGAUGCAGCCCCAG - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973