Stem-loop mdo-mir-12344

Accession

MI0040856

Description

Monodelphis domestica mdo-mir-12344 precursor miRNA

Sequence

175 reads, 3 reads per million, 5 experiments

cCGGACGGGAUCUGCACGGAGCccuccggucaccgggccugcUGCGUGCGUGUCUCCCGUCCAGg
((((((((((.(((((((.(((..(((((...)))))...))).)))))).)..)))))))).))

Structure

  -        -U -      G   -cc     u 
cC GGACGGGA  C UGCACG AGC   uccgg  
|| ||||||||  | |||||| |||   ||||| c
gG CCUGCCCU  G GCGUGC Ucg   gggcc  
  A        CU U      G   ucc     a 

Annotation confidence Low

Genome context

chr3: 488132646-488132710 [-]

Mature mdo-miR-12344-5p

• Accession: MIMAT0050228
• Description: Monodelphis domestica mdo-miR-12344-5p mature miRNA
• Sequence: 2 - CGGACGGGAUCUGCACGGAGC - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12344-3p

• Accession: MIMAT0050229
• Description: Monodelphis domestica mdo-miR-12344-3p mature miRNA
• Sequence: 43 - UGCGUGCGUGUCUCCCGUCCAG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973