Stem-loop mdo-mir-12345

Accession

MI0040857

Description

Monodelphis domestica mdo-mir-12345 precursor miRNA

Sequence

242 reads, 29 reads per million, 2 experiments

cugccuuauccagagaccagcugaccaggacauguccUUGGUUCUGUGAGAGGGGCAAUGGG
.((((((.(((((((.((((..(((........))).))))))))).))..)))))).....

Structure

----c      -a  -     a    cu   cag 
     ugccuu  uc cagag ccag  gac   g
     ||||||  || ||||| ||||  |||    
     ACGGGG  AG GUCUU GGUU  cug   a
GGGUA      AG  U     -    -c   uac 

Annotation confidence Not enough data

Genome context

chr3: 499814746-499814807 [-]

Mature mdo-miR-12345-3p

• Accession: MIMAT0050230
• Description: Monodelphis domestica mdo-miR-12345-3p mature miRNA
• Sequence: 38 - UUGGUUCUGUGAGAGGGGCAAUGGG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973