Stem-loop mdo-mir-12297c-1

Accession

MI0040862

Description

Monodelphis domestica mdo-mir-12297c-1 precursor miRNA

Sequence

13 reads, 2 reads per million, 4 experiments

ucCUUUGCGUGGCCCCUUGUUCUgagaguaacugaacgagaAUGAGGUGCUGUGCAAAGGACU
(((((((((((((.(((((((((...............))))))))).)))))))))))))..

Structure

--             C         gagagu 
  ucCUUUGCGUGGC CCUUGUUCU      a
  ||||||||||||| |||||||||      a
  AGGAAACGUGUCG GGAGUAaga      c
UC             U         gcaagu 

Annotation confidence Not enough data

Genome context

chr4: 18052695-18052757 [-]

Mature mdo-miR-12297c-5p

• Accession: MIMAT0050206
• Description: Monodelphis domestica mdo-miR-12297c-5p mature miRNA
• Sequence: 3 - CUUUGCGUGGCCCCUUGUUCU - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12297c-3p

• Accession: MIMAT0050239
• Description: Monodelphis domestica mdo-miR-12297c-3p mature miRNA
• Sequence: 42 - AUGAGGUGCUGUGCAAAGGACU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973