Stem-loop mdo-mir-12308b

Accession

MI0040864

Description

Monodelphis domestica mdo-mir-12308b precursor miRNA

Sequence

9 reads, 0 reads per million, 3 experiments

AGUAGGCAGCUUGGUACAGAGGaaagagcacuguaucuggaauuagagaauccagguucaaauccugccUUUGGUACUUACUGCCUAUAUGA
.((((((((...((((((((((...((....((.(((((((.........))))))).))..))...))))).)))))..))))))))....

Structure

---A        CUU     -     aaa  gcac  u       auu 
    GUAGGCAG   GGUAC AGAGG   ga    ug aucugga   a
    ||||||||   ||||| |||||   ||    || |||||||   g
    UAUCCGUC   UCAUG UUUcc   cu    ac uggaccu   a
AGUA        -AU     G     guc  --aa  u       aag 

Annotation confidence Not enough data

Genome context

chr4: 61378042-61378133 [-]

Mature mdo-miR-12308b-5p

• Accession: MIMAT0050240
• Description: Monodelphis domestica mdo-miR-12308b-5p mature miRNA
• Sequence: 1 - AGUAGGCAGCUUGGUACAGAGG - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12308b-3p

• Accession: MIMAT0050241
• Description: Monodelphis domestica mdo-miR-12308b-3p mature miRNA
• Sequence: 70 - UUUGGUACUUACUGCCUAUAUGA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973