Stem-loop mdo-mir-12353

Accession

MI0040874

Description

Monodelphis domestica mdo-mir-12353 precursor miRNA

Sequence

22 reads, 1 reads per million, 3 experiments

AGCCUGGAGUCAAGAAAAUCUGaguucaaauucagccucAUAUGCUUAACUCUGGGUUGC
((((((((((.(((.....((((((....)))))).........))).))))))))))..

Structure

--          C   ----AAAAU      u 
  AGCCUGGAGU AAG         CUGagu c
  |||||||||| |||         ||||||  
  UUGGGUCUCA UUC         gacuua a
CG          A   GUAUAcucc      a 

Annotation confidence Not enough data

Genome context

chr4: 326415432-326415491 [+]

Mature mdo-miR-12353-5p

• Accession: MIMAT0050258
• Description: Monodelphis domestica mdo-miR-12353-5p mature miRNA
• Sequence: 1 - AGCCUGGAGUCAAGAAAAUCUG - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12353-3p

• Accession: MIMAT0050259
• Description: Monodelphis domestica mdo-miR-12353-3p mature miRNA
• Sequence: 40 - AUAUGCUUAACUCUGGGUUGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973