Stem-loop mdo-mir-12358

Accession

MI0040881

Description

Monodelphis domestica mdo-mir-12358 precursor miRNA

Sequence

4447 reads, 71 reads per million, 5 experiments

UACCGAUGUGCUCUCAGAUCUaguaugucauguuuuaaagAUCUAUGAUUUCAUCGGUGUGAg
((((((((...((..((((((.................))))))..))...))))))))....

Structure

----        UGC  UC      aguaugu 
    UACCGAUG   UC  AGAUCU       c
    ||||||||   ||  ||||||       a
    GUGGCUAC   AG  UCUAga       u
gAGU        UUU  UA      aauuuug 

Annotation confidence High

Genome context

chr4: 395872534-395872596 [+]

Mature mdo-miR-12358-5p

• Accession: MIMAT0050271
• Description: Monodelphis domestica mdo-miR-12358-5p mature miRNA
• Sequence: 1 - UACCGAUGUGCUCUCAGAUCU - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12358-3p

• Accession: MIMAT0050272
• Description: Monodelphis domestica mdo-miR-12358-3p mature miRNA
• Sequence: 41 - AUCUAUGAUUUCAUCGGUGUGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973