Stem-loop mdo-mir-12379

Accession

MI0040910

Description

Monodelphis domestica mdo-mir-12379 precursor miRNA

Sequence

45 reads, 1 reads per million, 5 experiments

CACGCAGGUAGUGAUGUGUAGGUcucagcgcagcuaccuggaggcgcacaucaaccugcgggg
..(((((((..((((((((..(((((....(((....)))))))))))))))))))))))...

Structure

-CA       AG        AG     agcg   c 
   CGCAGGU  UGAUGUGU  GUcuc    cag u
   |||||||  ||||||||  |||||    |||  
   gcgucca  acuacacg  cggag    guc a
ggg       --        --     ----   c 

Annotation confidence Low

Genome context

chr6: 157286782-157286844 [-]

Mature mdo-miR-12379-5p

• Accession: MIMAT0050322
• Description: Monodelphis domestica mdo-miR-12379-5p mature miRNA
• Sequence: 1 - CACGCAGGUAGUGAUGUGUAGGU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973