Stem-loop mdo-mir-12380

Accession

MI0040912

Description

Monodelphis domestica mdo-mir-12380 precursor miRNA

Sequence

4356 reads, 91 reads per million, 4 experiments

UUCCCUCCUACGGCUCUCUGCAgagguaccagaugCAGAGGGAGGAGGUUGGGAUGa
.((((.(((.(..(((((((((...........)))))))))..))))..))))...

Structure

--U    -U   A GG         gagg 
   UCCC  CCU C  CUCUCUGCA    u
   ||||  ||| |  |||||||||    a
   AGGG  GGA G  GGGAGACgu    c
aGU    UU   - GA         agac 

Annotation confidence Not enough data

Genome context

chr6: 214307233-214307289 [-]

Mature mdo-miR-12380-5p

• Accession: MIMAT0050323
• Description: Monodelphis domestica mdo-miR-12380-5p mature miRNA
• Sequence: 1 - UUCCCUCCUACGGCUCUCUGCA - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12380-3p

• Accession: MIMAT0050324
• Description: Monodelphis domestica mdo-miR-12380-3p mature miRNA
• Sequence: 36 - CAGAGGGAGGAGGUUGGGAUG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973