Stem-loop mdo-mir-12389

Accession

MI0040923

Description

Monodelphis domestica mdo-mir-12389 precursor miRNA

Sequence

13 reads, 1 reads per million, 3 experiments

GCUGGGAAGGCGGCAGUAGccaauguccccugUCUGCUGUUUGCCUUCUCCAGc
(((((((((((((((((((.((........)).)))))).)))))))).)))))

Structure

     -        -      c  aug 
GCUGG GAAGGCGG CAGUAG ca   u
||||| |||||||| |||||| ||    
cGACC CUUCCGUU GUCGUC gu   c
     U        U      U  ccc 

Annotation confidence Not enough data

Genome context

chr8: 11943900-11943953 [-]

Mature mdo-miR-12389-5p

• Accession: MIMAT0050344
• Description: Monodelphis domestica mdo-miR-12389-5p mature miRNA
• Sequence: 1 - GCUGGGAAGGCGGCAGUAG - 19
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12389-3p

• Accession: MIMAT0050345
• Description: Monodelphis domestica mdo-miR-12389-3p mature miRNA
• Sequence: 33 - UCUGCUGUUUGCCUUCUCCAG - 53
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973