Stem-loop mdo-mir-12390

Accession

MI0040925

Description

Monodelphis domestica mdo-mir-12390 precursor miRNA

Sequence

38 reads, 1 reads per million, 3 experiments

UACACUACAUCUUUUCUUGGACUuugcucucaaaauaaagGUAGAGAAAGGUGUAUUGUAGA
((((.(((((((((.(((..(((((............))))).)))))))))))).))))..

Structure

--    C         U   GG     gcucu 
  UACA UACAUCUUU CUU  ACUuu     c
  |||| ||||||||| |||  |||||      
  AUGU AUGUGGAAA GAG  UGgaa     a
AG    U         -   -A     auaaa 

Annotation confidence Not enough data

Genome context

chr8: 46929987-46930048 [+]

Mature mdo-miR-12390-5p

• Accession: MIMAT0050347
• Description: Monodelphis domestica mdo-miR-12390-5p mature miRNA
• Sequence: 1 - UACACUACAUCUUUUCUUGGACU - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12390-3p

• Accession: MIMAT0050348
• Description: Monodelphis domestica mdo-miR-12390-3p mature miRNA
• Sequence: 41 - GUAGAGAAAGGUGUAUUGUAGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973