miRBase entry: mdo-mir-12396

Stem-loop mdo-mir-12396


Accession
MI0040933
Description
Monodelphis domestica mdo-mir-12396 precursor miRNA


Sequence

13 reads, 2 reads per million, 3 experiments
agAGAGAGACACAGACAAAACGUUUuguuuucugcuaugugaAACGUGUGUGUGUGUCUCUUUGg
..(((((((((((.(((..(((((((..............))))))).))).)))))))))))..

Structure
ag           G   AA       guuuuc 
  AGAGAGACACA ACA  ACGUUUu      u
  ||||||||||| |||  |||||||       
  UUUCUCUGUGU UGU  UGCAAag      g
gG           G   -G       uguauc 


Annotation confidence Not enough data
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Genome context
chr8: 300380325-300380389 [+]

Database links

Mature mdo-miR-12396-5p

Accession MIMAT0050360
Description Monodelphis domestica mdo-miR-12396-5p mature miRNA
Sequence 3 - AGAGAGACACAGACAAAACGUUU - 25
Evidence experimental
Illumina [1]

Mature mdo-miR-12396-3p

Accession MIMAT0050361
Description Monodelphis domestica mdo-miR-12396-3p mature miRNA
Sequence 43 - AACGUGUGUGUGUGUCUCUUUG - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973