Stem-loop mdo-mir-12398

Accession

MI0040935

Description

Monodelphis domestica mdo-mir-12398 precursor miRNA

Sequence

6 reads, 0 reads per million, 4 experiments

UGGACGAGGAGCGGCAUCGAGGaagaggccaccuccgcgCCCGAUGCCUGCCUCGUCCucc
.((((((((...(((((((.((..((((...))))....)))))))))..))))))))...

Structure

--U        AGC       A  --aa    c 
   GGACGAGG   GGCAUCG GG    gagg  
   ||||||||   ||||||| ||    |||| c
   CCUGCUCC   CCGUAGC CC    cucc  
ccu        -GU       -  gcgc    a 

Annotation confidence Not enough data

Genome context

NW_001584139.1: 57224-57284 [+]

Mature mdo-miR-12398-5p

• Accession: MIMAT0050364
• Description: Monodelphis domestica mdo-miR-12398-5p mature miRNA
• Sequence: 1 - UGGACGAGGAGCGGCAUCGAGG - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12398-3p

• Accession: MIMAT0050365
• Description: Monodelphis domestica mdo-miR-12398-3p mature miRNA
• Sequence: 40 - CCCGAUGCCUGCCUCGUCC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973