miRBase entry: mdo-mir-210b

Stem-loop mdo-mir-210b


Accession
MI0040936
Description
Monodelphis domestica mdo-mir-210b precursor miRNA


Sequence

206 reads, 0 reads per million, 5 experiments
UAGCCGCUGUCACACGCACAGUggguccugagcgcaAUGUGCGUUAGUCAGUGGCUCc
.((((((((.(..(((((((.((.((.....)).)).)))))))..).))))))))..

Structure
-U        U AC       G  g  c 
  AGCCGCUG C  ACGCACA Ug gu c
  |||||||| |  ||||||| || || u
  UCGGUGAC G  UGCGUGU ac cg g
cC        U AU       A  g  a 


Annotation confidence Not enough data
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Genome context
NW_001584700.1: 16429-16486 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-210b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-210b-5p

Accession MIMAT0050366
Description Monodelphis domestica mdo-miR-210b-5p mature miRNA
Sequence 1 - UAGCCGCUGUCACACGCACAGU - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-210b-3p

Accession MIMAT0050367
Description Monodelphis domestica mdo-miR-210b-3p mature miRNA
Sequence 37 - AUGUGCGUUAGUCAGUGGCUC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973