Stem-loop mdo-mir-12399

Accession

MI0040939

Description

Monodelphis domestica mdo-mir-12399 precursor miRNA

Sequence

7 reads, 1 reads per million, 2 experiments

GUCAGGGCGGGCCUGGGCCGGgugggggcggcgcccucgGCCCCACCCCGUCUCCCUGACCGC
(((((((((((...((((((((.((.(....).))))))))))...))))...)))))))...

Structure

---       ---    CCU        u  g g 
   GUCAGGG   CGGG   GGGCCGGg gg g c
   |||||||   ||||   |||||||| || |  
   CAGUCCC   GCCC   CCCGgcuc cc c g
CGC       UCU    CAC        -  g g 

Annotation confidence Not enough data

Genome context

NW_001586973.1: 12155-12217 [+]

Mature mdo-miR-12399-5p

• Accession: MIMAT0050372
• Description: Monodelphis domestica mdo-miR-12399-5p mature miRNA
• Sequence: 1 - GUCAGGGCGGGCCUGGGCCGG - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12399-3p

• Accession: MIMAT0050373
• Description: Monodelphis domestica mdo-miR-12399-3p mature miRNA
• Sequence: 40 - GCCCCACCCCGUCUCCCUGACCGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973