Stem-loop mdo-mir-7385i-1

Accession

MI0040943

Description

Monodelphis domestica mdo-mir-7385i-1 precursor miRNA

Sequence

9687 reads, 175 reads per million, 5 experiments

AGGUCAGAUAUUCUGUCUUUCAgugauauacacccugGAACACAGGCUAGCUGAUCUGG
(((((((.((.(((((.((((((.(........))))))).))))).)).)))))))..

Structure

--       A  U     C      u aua 
  AGGUCAG UA UCUGU UUUCAg g   u
  ||||||| || ||||| |||||| |    
  UCUAGUC AU GGACA AAGguc c   a
GG       G  C     C      - cac 

Annotation confidence High

Genome context

chrX: 4616788-4616846 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from mdo-mir-7385i-1

Mature mdo-miR-7385i-5p

• Accession: MIMAT0050375
• Description: Monodelphis domestica mdo-miR-7385i-5p mature miRNA
• Sequence: 1 - AGGUCAGAUAUUCUGUCUUUCA - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7385i-3p

• Accession: MIMAT0050379
• Description: Monodelphis domestica mdo-miR-7385i-3p mature miRNA
• Sequence: 38 - GAACACAGGCUAGCUGAUCUGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973