miRBase entry: mdo-mir-7385g-3

Stem-loop mdo-mir-7385g-3


Accession
MI0040944
Description
Monodelphis domestica mdo-mir-7385g-3 precursor miRNA


Sequence

25319 reads, 568.0 reads per million, 5 experiments
UAGUCUGAUAUUCCAUGUUUCUAUgauauaaaacuugGAGCACAGAAUGUCAGACCUAGA
..(((((((((((..((((((...............))))))..))))))))))).....

Structure
---UA           CA      UAUgau 
     GUCUGAUAUUC  UGUUUC      a
     |||||||||||  ||||||      u
     CAGACUGUAAG  ACGAGg      a
AGAUC           AC      uucaaa 


Annotation confidence High
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Genome context
ref|NC_077235.2|: 3697963-3698022 [-]
Clustered miRNAs
11 other miRNAs are < 10 kb from mdo-mir-7385g-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7385g-5p

Accession MIMAT0050380
Description Monodelphis domestica mdo-miR-7385g-5p mature miRNA
Sequence 1 - UAGUCUGAUAUUCCAUGUUUCUAU - 24
Evidence experimental
Illumina [1]

Mature mdo-miR-7385g-3-3p

Accession MIMAT0050381
Description Monodelphis domestica mdo-miR-7385g-3-3p mature miRNA
Sequence 38 - GAGCACAGAAUGUCAGACCUAGA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973