Stem-loop mdo-mir-1545e-1

Accession

MI0040949

Description

Monodelphis domestica mdo-mir-1545e-1 precursor miRNA

Sequence

375 reads, 11 reads per million, 5 experiments

AGUGUCCUGGGAUAGAUAGGugaucccuuugcaauccUCCUUUCCAUCCUGGGCAUUGG
(((((((.(((((.((.(((.(((.........)))..))).)).))))))))))))..

Structure

--       U     A  U   -u   ccc 
  AGUGUCC GGGAU GA AGG  gau   u
  ||||||| ||||| || |||  |||   u
  UUACGGG UCCUA CU UCC  cua   u
GG       -     C  U   Uc   acg 

Annotation confidence High

Genome context

chrX: 13930496-13930554 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from mdo-mir-1545e-1

Mature mdo-miR-1545e-5p

• Accession: MIMAT0050390
• Description: Monodelphis domestica mdo-miR-1545e-5p mature miRNA
• Sequence: 1 - AGUGUCCUGGGAUAGAUAGG - 20
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-1545e-3p

• Accession: MIMAT0050391
• Description: Monodelphis domestica mdo-miR-1545e-3p mature miRNA
• Sequence: 38 - UCCUUUCCAUCCUGGGCAUUGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973