Stem-loop mdo-mir-1545g-3

Accession

MI0040955

Description

Monodelphis domestica mdo-mir-1545g-3 precursor miRNA

Sequence

3211 reads, 92.0 reads per million, 5 experiments

AGUGUCCUGGGAUAGAUAGGAGAuccccuugcaauccCCCUUUCCAUCCCGGGCAUUGGu
((((.((((((((.((.(((.(((.........)))..))).)).))))))))))))...

Structure

---    U        A  U   -A   ccc 
   AGUG CCUGGGAU GA AGG  GAu   c
   |||| |||||||| || |||  |||   u
   UUAC GGGCCCUA CU UCC  cua   u
uGG    -        C  U   Cc   acg 

Annotation confidence High

Genome context

ref|NC_077235.2|: 13828529-13828588 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from mdo-mir-1545g-3

Mature mdo-miR-1545g-3-5p

• Accession: MIMAT0050396
• Description: Monodelphis domestica mdo-miR-1545g-3-5p mature miRNA
• Sequence: 1 - AGUGUCCUGGGAUAGAUAGGAGA - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-1545g-3p

• Accession: MIMAT0050389
• Description: Monodelphis domestica mdo-miR-1545g-3p mature miRNA
• Sequence: 38 - CCCUUUCCAUCCCGGGCAUUGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973