miRBase entry: mdo-mir-7386q

Stem-loop mdo-mir-7386q


Accession
MI0040968
Description
Monodelphis domestica mdo-mir-7386q precursor miRNA


Sequence

4038 reads, 235.0 reads per million, 5 experiments
AUCUGGACUAUGUUCUUCAAUAUguguaucuaaaacAUAGAAGAAUAAGGUCCAUAGA
...((((((.((((((((..(((((.........))))))))))))).))))))....

Structure
-AUC      A        AA     gua 
    UGGACU UGUUCUUC  UAUgu   u
    |||||| ||||||||  |||||   c
    ACCUGG AUAAGAAG  AUAca   u
AGAU      A        --     aaa 


Annotation confidence High
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Genome context
ref|NC_077235.2|: 54976419-54976476 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from mdo-mir-7386q
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7386q-5p

Accession MIMAT0050417
Description Monodelphis domestica mdo-miR-7386q-5p mature miRNA
Sequence 1 - AUCUGGACUAUGUUCUUCAAUAU - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-7386q-3p

Accession MIMAT0050418
Description Monodelphis domestica mdo-miR-7386q-3p mature miRNA
Sequence 37 - AUAGAAGAAUAAGGUCCAUAGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973