miRBase entry: mdo-mir-12403

Stem-loop mdo-mir-12403


Accession
MI0040972
Description
Monodelphis domestica mdo-mir-12403 precursor miRNA


Sequence

1229 reads, 45.0 reads per million, 5 experiments
UAGCCCUUGCCCUUUUCUGUCUUAgaauuguuacUAAGACAGAAAGUAAGGGUUUgcu
.(((((((((...((((((((((((........)))))))))))))))))))))....

Structure
---U         CCU            aau 
    AGCCCUUGC   UUUCUGUCUUAg   u
    |||||||||   ||||||||||||    
    UUGGGAAUG   AAAGACAGAAUc   g
ucgU         ---            auu 


Annotation confidence High
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Genome context
ref|NC_077235.2|: 44035581-44035638 [-]
Clustered miRNAs
20 other miRNAs are < 10 kb from mdo-mir-12403
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-12403-5p

Accession MIMAT0050425
Description Monodelphis domestica mdo-miR-12403-5p mature miRNA
Sequence 1 - UAGCCCUUGCCCUUUUCUGUCUUA - 24
Evidence experimental
Illumina [1]

Mature mdo-miR-12403-3p

Accession MIMAT0050426
Description Monodelphis domestica mdo-miR-12403-3p mature miRNA
Sequence 35 - UAAGACAGAAAGUAAGGGUUU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973