miRBase entry: mdo-mir-12407

Stem-loop mdo-mir-12407


Accession
MI0040990
Description
Monodelphis domestica mdo-mir-12407 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
UGUGCUGCCUCGCUGCCUCACuuucucuugcuauagAGAGGACACAUGGUGAGCACAUg
(((((((((..(.((((((.((............)).)))).)))..))).))))))..

Structure
--      -   UC C  -    A  uucuc 
  UGUGCU GCC  G UG CCUC Cu     u
  |||||| |||  | || |||| ||      
  ACACGA UGG  C AC GGAG ga     u
gU      G   UA -  A    A  uaucg 


Annotation confidence Not enough data
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Genome context
chrX: 67707710-67707768 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-12407
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-12407-5p

Accession MIMAT0050455
Description Monodelphis domestica mdo-miR-12407-5p mature miRNA
Sequence 1 - UGUGCUGCCUCGCUGCCUCAC - 21
Evidence experimental
Illumina [1]

Mature mdo-miR-12407-3p

Accession MIMAT0050456
Description Monodelphis domestica mdo-miR-12407-3p mature miRNA
Sequence 37 - AGAGGACACAUGGUGAGCACAU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973