miRBase entry: mdo-mir-12366b

Stem-loop mdo-mir-12366b


Accession
MI0040993
Description
Monodelphis domestica mdo-mir-12366b precursor miRNA


Sequence

6883 reads, 140 reads per million, 5 experiments
CCUGCAGCUCUGAGAUUCUAUGauucugcuaugaugugaUCAUAGAGUGUUAGUGCUGGGAgg
(((.((((.((((.(((((((((((..((......))))))))))))).)))).))))..)))

Structure
   -G    U    G           cu  ua 
CCU  CAGC CUGA AUUCUAUGauu  gc  u
|||  |||| |||| |||||||||||  ||   
ggA  GUCG GAUU UGAGAUACUag  ug  g
   GG    U    G           --  ua 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chrX: 69500452-69500514 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-12366b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-12366b-5p

Accession MIMAT0050461
Description Monodelphis domestica mdo-miR-12366b-5p mature miRNA
Sequence 1 - CCUGCAGCUCUGAGAUUCUAUG - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12366b-3p

Accession MIMAT0050462
Description Monodelphis domestica mdo-miR-12366b-3p mature miRNA
Sequence 40 - UCAUAGAGUGUUAGUGCUGGGA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973