miRBase entry: spu-mir-13260-2

Stem-loop spu-mir-13260-2


Accession
MI0047945
Description
Strongylocentrotus purpuratus spu-mir-13260-2 precursor miRNA


Sequence


cgaugacaucaucuauggguuaaguccuuuUAUAUGAUCAAUGACAUAUGAGuauauuuacauucccCAUGUGUAUUUGAUCAUAUCUAaggcaaaccuuguaucagcucagcaucgac
(((((...........(((((..(.((((..((((((((((..(((((((.................)))))))..))))))))))..))))).))))).............)))))..

Structure
--     --acaucaucuau     aa u    uU          UG       AGuauau 
  cgaug             ggguu  g ccuu  AUAUGAUCAA  ACAUAUG       u
  |||||             |||||  | ||||  ||||||||||  |||||||       u
  gcuac             uccaa  c ggaA  UAUACUAGUU  UGUGUAC       a
ca     gacucgacuaugu     -a -    UC          UA       cccuuac 


Annotation confidence Not enough data
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Genome context
gb|AAGJ06000868.1|: 421511-421629 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from spu-mir-13260-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spu-miR-13260-2-5p

Accession MIMAT0074211
Description Strongylocentrotus purpuratus spu-miR-13260-2-5p mature miRNA
Sequence 31 - UAUAUGAUCAAUGACAUAUGAG - 52
Evidence not_experimental

Mature spu-miR-13260-2-3p

Accession MIMAT0074212
Description Strongylocentrotus purpuratus spu-miR-13260-2-3p mature miRNA
Sequence 68 - CAUGUGUAUUUGAUCAUAUCUA - 89
Evidence not_experimental

References