Accession
MI0048367
Description
Xenopus tropicalis
xtr-mir-427a-78 precursor miRNA
Sequence
gaaaagucacuauuuauccaauuugauaucACCCAAAACUAAGCCCGCUCUUGUguucccuugauggucagAAAGUGCUUCCUGUUUUGGGCGUuaucgauuggaaaauucaacuuuugacggu
.((((((....((((.(((((((.((((.(.((((((((.((((..(((.((.((...((.....)).)).)))))))))...)))))))).).)))))))))))))))...))))))......
.((((((....((((.(((((((.((((.(.((((((((.((((..(((.((.((...((.....)).)).)))))))))...)))))))).).)))))))))))))))...))))))......
Structure
-----g cacu a u u A --U CC C G uuc u
aaaagu auuu uccaauu gaua c CCCAAAAC AAGC GCU UU Ug cc u
|||||| |||| ||||||| |||| | |||||||| |||| ||| || || || g
uuuuca uaaa agguuag cuau G GGGUUUUG UUCG UGA AA ac gg a
uggcag -acu - - U C UCC -- - g --u u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
3: 146261607-146261730 [-]
Clustered miRNAs
17 other miRNAs are < 10 kb from xtr-mir-427a-78
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-miR-427a-5p
| Accession | MIMAT0074997 |
| Description | Xenopus tropicalis xtr-miR-427a-5p mature miRNA |
| Sequence | 31 - ACCCAAAACUAAGCCCGCUCUUGU - 54 |
| Evidence | not_experimental |
Mature xtr-miR-427a-3p
| Accession | MIMAT0074996 |
| Description | Xenopus tropicalis xtr-miR-427a-3p mature miRNA |
| Sequence | 72 - AAAGUGCUUCCUGUUUUGGGCGU - 94 |
| Evidence | not_experimental |
References
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