Accession
MI0048383
Description
Xenopus tropicalis
xtr-mir-427a-54 precursor miRNA
Sequence
ucaagaucuuuuucagaacGAAUAAGUAGCACUCAAAACGGGGCUCUCUCUuguguaugaauuauggugagAAAGUGCUUUCUGUUUUGGGCGUuguggacaucagauauacagcauggaauug
.....((((..((((.((((...........(((((((((((((.((.((((.((((.....))))..)))).)).)))..)))))))))))))).))))....))))................
.....((((..((((.((((...........(((((((((((((.((.((((.((((.....))))..)))).)).)))..)))))))))))))).))))....))))................
Structure
-----------ucaag --uu g AAUAAGUAGCA -- U C -g u
aucu uuca aacG CUCAAAACGG GGC CU UCUu ugua g
|||| |||| |||| |||||||||| ||| || |||| |||| a
uaga aggu uUGC GGGUUUUGUC UCG GA Agag guau a
guuaagguacgacaua cuac g ----------- UU U A ug u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
3: 146261476-146261599 [-]
Clustered miRNAs
17 other miRNAs are < 10 kb from xtr-mir-427a-54
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-miR-427a-54-5p
| Accession | MIMAT0075005 |
| Description | Xenopus tropicalis xtr-miR-427a-54-5p mature miRNA |
| Sequence | 20 - GAAUAAGUAGCACUCAAAACGGGGCUCUCUCU - 51 |
| Evidence | not_experimental |
Mature xtr-miR-427a-3p
| Accession | MIMAT0074996 |
| Description | Xenopus tropicalis xtr-miR-427a-3p mature miRNA |
| Sequence | 72 - AAAGUGCUUUCUGUUUUGGGCGU - 94 |
| Evidence | not_experimental |
References
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