miRBase entry: xtr-mir-13315

Stem-loop xtr-mir-13315


Accession
MI0048387
Description
Xenopus tropicalis xtr-mir-13315 precursor miRNA


Sequence


auuuguguuuagagaaaaggagccacuucuGCUGACAACAUGAGGCACAUGCUaauaagagaguagUAAGUGCUUCACGUUUUGGCAUauaugacuucucauuauguacuuguuccag
..................(((((......((((((.(((.((((((((.(((((.........))))).)))))))).)))))))))(((((((.......)))))))...)))))..

Structure
auuuguguuuagagaaaa     ------------------cacuuc      C   A        A     aua 
                  ggagc                        uGCUGA AAC UGAGGCAC UGCUa   a
                  |||||                        |||||| ||| |||||||| |||||   g
                  ccuug                        ACGGUU UUG ACUUCGUG AUgau   a
----------------ga     uucauguauuacucuucaguauaU      -   C        A     gag 


Annotation confidence Not enough data
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Genome context
1: 68986060-68986177 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from xtr-mir-13315
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-13315-5p

Accession MIMAT0075008
Description Xenopus tropicalis xtr-miR-13315-5p mature miRNA
Sequence 31 - GCUGACAACAUGAGGCACAUGCU - 53
Evidence not_experimental

Mature xtr-miR-13315-3p

Accession MIMAT0075009
Description Xenopus tropicalis xtr-miR-13315-3p mature miRNA
Sequence 67 - UAAGUGCUUCACGUUUUGGCAU - 88
Evidence not_experimental

References