Accession
MI0048395
Description
Xenopus tropicalis
xtr-let-7j precursor miRNA
Sequence
ccccuaguggccgccgcagccuuggcgggaUGAGGUAGUAGGUUGUGUGGUUucagggcagugauuuuugccccaaucaggagauaaCUAUACAACCUACUGCCUUCCCcggcaggcaccaugucgucgaggcccaau
......(.((((..((((((((.(.((((..(((((((((((((((((((((...((((((......))))))..(((....)))))))))))))))))))))))).)))).)))))....)).))....)))))...
......(.((((..((((((((.(.((((..(((((((((((((((((((((...((((((......))))))..(((....)))))))))))))))))))))))).)))).)))))....)).))....)))))...
Structure
ccccua u --gc - ---- u g aU ---------uca ug
g ggcc cg ca gccu g cggg GAGGUAGUAGGUUGUGUGGUU gggcag a
| |||| || || |||| | |||| ||||||||||||||||||||| ||||||
c ccgg gc gu cgga c gcCC UUCCGUCAUCCAACAUAUCaa cccguu u
---uaa - agcu u acca - g -C uagaggacuaac uu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
3: 3748596-3748733 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-let-7j
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-let-7j-5p
| Accession | MIMAT0075020 |
| Description | Xenopus tropicalis xtr-let-7j-5p mature miRNA |
| Sequence | 31 - UGAGGUAGUAGGUUGUGUGGUU - 52 |
| Evidence | not_experimental |
Mature xtr-let-7j-3p
| Accession | MIMAT0075021 |
| Description | Xenopus tropicalis xtr-let-7j-3p mature miRNA |
| Sequence | 88 - CUAUACAACCUACUGCCUUCCC - 109 |
| Evidence | not_experimental |
References
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