Accession
MI0000354
Description
Drosophila melanogaster
dme-mir-184 precursor miRNA
Gene family
MIPF0000059;
mir-184
Literature search
28 open access papers mention dme-mir-184
(58 sentences)
(58 sentences)
Sequence
21531115
reads,
120037
reads per million, 49 experiments
gguuggccggugcauucguacCCUUAUCAUUCUCUCGCCCCGugugcacuuaaagacaacUGGACGGAGAACUGAUAAGGGCucguaucaccaauucauc
((....))((((.((.((..((((((((((((((.((((...(((..........)))...)).))))))).)))))))))..)).))))))........
((....))((((.((.((..((((((((((((((.((((...(((..........)))...)).))))))).)))))))))..)).))))))........
Structure
gguuggcc c u ua - U - CCG gcac
ggug au cg cCCUUAUCA UUCUC CG CC ugu u
|||| || || ||||||||| ||||| || || |||
ccac ua gc GGGAAUAGU AAGAG GC GG aca u
cuacuuaa - u uC C - A Uca gaaa
Annotation confidence
High
Do you think this miRNA is real?
Comments
miR-184 was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the 5' end of the excised miRNA by cloning and reported a length distribution of 19-23 nt with 22 nt the most commonly expressed. They also reported the less predominantly expressed sequence miR-184* from the opposite 5' arm.
Genome context
chr2R: 13329402-13329501 [-]
Database links
Mature dme-miR-184-5p
| Accession | MIMAT0000330 |
| Description | Drosophila melanogaster dme-miR-184-5p mature miRNA |
| Sequence | 22 - CCUUAUCAUUCUCUCGCCCCG - 42 |
| Evidence |
experimental
cloned [2], 454 [3-4], Illumina [4] |
| Database links |
|
Mature dme-miR-184-3p
| Accession | MIMAT0000331 |
| Description | Drosophila melanogaster dme-miR-184-3p mature miRNA |
| Sequence | 61 - UGGACGGAGAACUGAUAAGGGC - 82 |
| Evidence |
experimental
Northern [1], cloned [2], 454 [3-4], Illumina [4] |
| Database links |
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| Predicted targets |
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References
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