Stem-loop bta-mir-29b-2

Accession

MI0005043

Description

Bos taurus bta-mir-29b-2 precursor miRNA

Gene family

MIPF0000009; mir-29

Literature search

39 open access papers mention bta-mir-29b-2
(264 sentences)

Sequence

3107 reads, 379 reads per million, 74 experiments

cuucuggaagcugguuucacaugguggcuuagauuuuuccaucuuuguaucUAGCACCAUUUGAAAUCAGUGUUuuaggag
(((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).)))))))))

Structure

         -          c      g  u    uuuucc 
cuucuggaa gcugguuuca auggug cu agau      a
||||||||| |||||||||| |||||| || ||||       
gaggauuUU UGACUAAAGU UACCAC GA Ucua      u
         G          U      -  -    uguuuc 

Annotation confidence High

Genome context

chr16: 77732601-77732681 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-29b-2

Mature bta-miR-29b

• Accession: MIMAT0003828
• Description: Bos taurus bta-miR-29b mature miRNA
• Sequence: 52 - UAGCACCAUUUGAAAUCAGUGUU - 74
• Evidence: experimental ; cloned [1,4], Array [2], qRT-PCR [2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19170227
   Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
   "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
   "Mol Reprod Dev (2009) 76:665-677