Stem-loop dps-mir-2520

Accession

MI0011653

Description

Drosophila pseudoobscura dps-mir-2520 precursor miRNA

Sequence

gggaguugauuucaagaacggaucguaguacugaucgagacgcuugcuacuggagaauucgacuuccAAUAGCAACGCCCUUUCGAUUAGUucugcaaucaaaaaaagcaucgcauacca
((....((((..........(((.((((.(((((((((((.((((((((.(((((........))))).)))))).))..))))))))))).)))).))).........))))....)).

Structure

-  gagu    uucaagaacg   c    u           -c  -      c     aau 
 gg    ugau          gau guag acugaucgaga  gc uugcua uggag   u
 ||    ||||          ||| |||| |||||||||||  || |||||| |||||    
 cc    gcua          cua cguc UGAUUAGCUUU  CG AACGAU Accuu   c
a  auac    -cgaaaaaaa   a    u           CC  C      A     cag 

Annotation confidence Not enough data

Genome context

XL_group1e: 8362599-8362718 [-]

Clustered miRNAs

10 other miRNAs are < 10 kb from dps-mir-2520

Mature dps-miR-2520

• Accession: MIMAT0012308
• Description: Drosophila pseudoobscura dps-miR-2520 mature miRNA
• Sequence: 68 - AAUAGCAACGCCCUUUCGAUUAGU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9