Stem-loop sequence aly-MIR166f

AccessionMI0014537 (change log)
DescriptionArabidopsis lyrata miR166f stem-loop
Gene family MIPF0000004; MIR166
Stem-loop
        c   u      u      cu   g c   uc    -    --g     g 
5' aaguu agg gaauga gccugg  cga a cau  cauc ucau   aucau a
   ||||| ||| |||||| ||||||  ||| | |||  |||| ||||   |||||  
3' uucaa ucc cuuacu cggacc  gcu u gua  guag agua   uagua u
        c   c      u      ag   g a   --    u    aua     g 
Get sequence
Deep sequencing
134 reads, 4.1e+03 reads per million, 1 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (v1.0; GCA_000004255.1) Overlapping transcripts
GL348720.1: 4172055-4172159 [-]
intergenic
Database links

Mature sequence aly-miR166f-5p

Accession MIMAT0017469
Previous IDsaly-miR166f*
Sequence

10 - 

ugaaugaugccuggcucgaga

 - 30

Get sequence
Evidence experimental; Illumina [1], SOLiD [2]

Mature sequence aly-miR166f-3p

Accession MIMAT0017470
Previous IDsaly-miR166f
Sequence

78 - 

ucggaccaggcuucauucccc

 - 98

Get sequence
Deep sequencing134 reads, 1 experiments
Evidence experimental; Illumina [1], SOLiD [2]
Database links

References

1
PMID:20407027 "MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana" Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC Plant Cell. 22:1074-1089(2010).
2