Accession
MI0000124
Description
Drosophila melanogaster
dme-mir-6-1 precursor miRNA mir-6
Gene
family?
family?
RF00143;
mir-6
Literature search
8 open access papers mention dme-mir-6-1
(40 sentences)
(40 sentences)
Sequence
19893
reads,
493
reads per million, 37 experiments
uuuaauguagAGGGAAUAGUUGCUGUGCUGUAaguuaauauaccauaucuaUAUCACAGUGGCUGUUCUUUUUguaccuaaa
.......((((((((((((((((((((.((((.((...........)).)))).))))))))))))))))))))........
.......((((((((((((((((((((.((((.((...........)).)))).))))))))))))))))))))........
Structure
-uuuaaug C a uaau
uagAGGGAAUAGUUGCUGUG UGUA gu a
|||||||||||||||||||| |||| || u
gUUUUUCUUGUCGGUGACAC AUau ua a
aaauccau U c uacc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2R: 19661003-19661084 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from dme-mir-6-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-6-3p
| Accession | MIMAT0000111 |
| Description | Drosophila melanogaster dme-miR-6-3p mature miRNA |
| Sequence | 52 - UAUCACAGUGGCUGUUCUUUUU - 73 |
| Evidence |
experimental
cloned [1,3], Northern [1-2], 454 [4], Illumina [5] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-6-1-5p
| Accession | MIMAT0020787 |
| Description | Drosophila melanogaster dme-miR-6-1-5p mature miRNA |
| Sequence | 11 - AGGGAAUAGUUGCUGUGCUGUA - 32 |
| Evidence | not_experimental |
| Database links |
|
References
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